Influenza

Acute respiratory infection caused by influenza A or B viruses, characterised by fever, myalgia, cough, and headache. Seasonal epidemics cause significant morbidity and mortality, particularly in the elderly and high-risk groups. Annual vaccination is the primary prevention strategy.

Key Facts

Influenza A and B cause seasonal epidemics; influenza A causes pandemics due to antigenic shift (reassortment of genome segments) Annual UK vaccination programme: offered to all aged ≥65, pregnant women, chronic disease, healthcare workers, children aged 2–10 (nasal spray) Oseltamivir (Tamiflu) 75mg BD for 5 days: neuraminidase inhibitor — effective if started within 48 hours of symptom onset (NICE TA168) Complications: secondary bacterial pneumonia (S. aureus, S. pneumoniae), myocarditis, encephalitis, Guillain-Barré syndrome, Reye syndrome (aspirin in children) UK burden: ~10,000–25,000 excess deaths/year in severe influenza seasons Antigenic drift: minor mutations → seasonal epidemics; antigenic shift: major reassortment → pandemics (1918, 1957, 1968, 2009) High-risk groups for complications: >65, <2 years, pregnancy, chronic respiratory/cardiac/renal/liver disease, immunocompromised, diabetes, BMI >40 Diagnosis: nasopharyngeal swab for influenza PCR (rapid point-of-care tests also available)

Overview

Key Facts

Influenza is a major cause of morbidity and mortality in the UK, particularly during winter months. Vaccination remains the most effective preventive strategy. Antiviral treatment should be initiated promptly in at-risk patients.

Epidemiology

  • UK: ~10,000–25,000 excess winter deaths attributable to influenza in severe seasons
  • Global: 3–5 million severe cases/year; 290,000–650,000 deaths/year (WHO)
  • Seasonal peaks: November–March in Northern Hemisphere
  • Attack rate: 5–10% of adults, 20–30% of children annually
  • Pandemics: H1N1 (2009), H3N2 (1968), H2N2 (1957), H1N1 (1918 — 50 million deaths)

Aetiology

  • Influenza A: subtypes defined by haemagglutinin (H1–18) and neuraminidase (N1–11); infects humans, birds, pigs
  • Influenza B: two lineages (Victoria, Yamagata); humans only; typically milder
  • Influenza C: mild, sporadic
  • Transmission: respiratory droplets, aerosols, fomites; incubation 1–4 days; infectious from 1 day before to 5–7 days after symptom onset

Pathophysiology

  • Virus binds sialic acid residues on respiratory epithelial cells via haemagglutinin
  • Neuraminidase cleaves sialic acid → release of progeny virions → spread
  • Epithelial cell death → mucosal inflammation → susceptibility to secondary bacterial infection
  • Systemic inflammatory response: cytokine release → fever, myalgia, malaise
  • Severe disease: viral pneumonitis → ARDS; secondary bacterial pneumonia (S. aureus, S. pneumoniae)
  • Antigenic drift: point mutations in HA/NA genes → seasonal epidemics (need annual vaccine update)
  • Antigenic shift: reassortment between human and animal influenza A strains → novel virus → pandemic

Clinical Presentation

Typical Presentation

  • Sudden onset high fever (>38.5°C), rigors
  • Severe myalgia and arthralgia
  • Headache
  • Dry cough
  • Sore throat
  • Prostration and malaise (often more severe than common cold)
  • Duration: 5–7 days (cough may persist 2 weeks)

Complications

  • Primary viral pneumonia: progressive dyspnoea, bilateral infiltrates → ARDS
  • Secondary bacterial pneumonia: classically S. aureus (rapid onset, cavitation) or S. pneumoniae (after initial improvement)
  • Myocarditis/pericarditis: chest pain, troponin elevation
  • Encephalitis/encephalopathy: rare, confusion, seizures
  • Rhabdomyolysis: myalgia, raised CK, AKI
  • Reye syndrome: hepatic encephalopathy in children given aspirin
  • Exacerbation of chronic disease: COPD, asthma, heart failure

Red Flags

  • Dyspnoea, tachypnoea, SpO2 <92%
  • Haemoptysis
  • Persistent fever >5 days (secondary infection)
  • Confusion or altered consciousness
  • Dehydration, unable to tolerate oral fluids
  • High-risk patient with typical influenza symptoms

Differential Diagnosis

DiagnosisKey FeaturesInvestigation
COVID-19Similar presentation, anosmia, endemicSARS-CoV-2 PCR
RSVBronchiolitis (children), elderlyRSV PCR
Common cold (rhinovirus)Milder, coryzal symptoms predominate, no prostrationClinical diagnosis
Bacterial pneumoniaProductive cough, focal consolidation, higher CRPCXR, sputum culture
Mycoplasma pneumoniaeYounger adults, dry cough, gradual onset, erythema multiformeMycoplasma PCR/serology
MeningitisNeck stiffness, photophobia, rashLP, blood cultures

Diagnosis / Investigation

Bedside

  • Nasopharyngeal swab: influenza PCR (gold standard) — also tests for COVID-19 and RSV (multiplex PCR)
  • Point-of-care rapid influenza test: less sensitive (~60–70%) but fast (15 min)
  • SpO2: assess severity
  • NEWS2: escalation tool

Bloods

  • FBC: lymphopenia, relative leucopenia (high WCC suggests secondary bacterial infection)
  • CRP/procalcitonin: CRP moderately raised; procalcitonin low in viral, high if bacterial superinfection
  • U&Es, LFTs: assess organ function
  • CK: if rhabdomyolysis suspected
  • Blood cultures: if secondary bacterial infection suspected
  • Blood gas: if respiratory compromise

Imaging

  • CXR: if pneumonia suspected — bilateral interstitial infiltrates (viral) or lobar consolidation (bacterial)
  • CT chest: if complicated pneumonia, ARDS

Special Tests

  • Viral typing/subtyping: for surveillance (PHE/UKHSA)
  • Sputum culture: if secondary bacterial pneumonia suspected

Management

Non-pharmacological

  • Rest and hydration: adequate oral fluid intake
  • Isolation: respiratory droplet precautions; stay home for ≥5 days from symptom onset
  • Infection control in hospital: surgical mask, hand hygiene, single room if possible

Pharmacological

Antivirals (NICE TA168):

  • Oseltamivir (Tamiflu) 75mg BD for 5 days: indicated in at-risk patients within 48 hours of symptoms
  • Zanamivir (Relenza) 10mg BD inhaled for 5 days: alternative if oseltamivir contraindicated
  • Consider in hospitalised patients even if >48 hours from onset (may still reduce duration)
  • Post-exposure prophylaxis: oseltamivir 75mg OD for 10 days for close contacts of confirmed cases who are at risk

Symptomatic treatment:

  • Paracetamol/ibuprofen for fever and myalgia
  • Avoid aspirin in children <16 (Reye syndrome risk)

Secondary bacterial pneumonia:

  • Treat per NICE NG138 (community-acquired pneumonia guidelines)
  • Co-amoxiclav 625mg TDS or doxycycline 200mg loading then 100mg OD
  • If severe/S. aureus suspected: flucloxacillin 1g QDS IV ± gentamicin

Vaccination (annual):

  • Quadrivalent inactivated vaccine: ≥65 (adjuvanted — aQIV), pregnant women, at-risk adults
  • Live attenuated nasal spray (LAIV): children aged 2–10
  • Healthcare workers: annual vaccination recommended
  • Timing: September–November (before flu season peak)

Surgical/Interventional

  • Not applicable for uncomplicated influenza
  • Ventilatory support (NIV/invasive) for ARDS
  • ECMO: in refractory ARDS (specialist centres)

Referral Criteria

  • Hospital admission: severe symptoms, SpO2 <92%, dehydration, complications
  • ICU: ARDS, septic shock, multi-organ failure
  • Public health notification: not individually notifiable but outbreaks are reportable

Prognosis

  • Uncomplicated influenza: self-limiting in 5–7 days in most healthy adults
  • Hospitalisation rate: ~1% overall, much higher in elderly and high-risk groups
  • UK excess winter deaths attributable to influenza: 10,000–25,000 in severe seasons
  • Secondary bacterial pneumonia mortality: 10–30%
  • ARDS from influenza: ICU mortality ~30–40%
  • Vaccination reduces hospitalisation by 40–60% (higher in well-matched seasons)
  • Oseltamivir: reduces symptom duration by ~1 day and reduces complications in at-risk groups
  • Pandemic influenza (e.g. 1918 H1N1): case-fatality rate was ~2–3% (50 million deaths globally)
  • Children: generally good prognosis; rare fulminant cases with encephalopathy

Other Relevant Information

UK Influenza Vaccination Programme

GroupVaccine Type
Age ≥65Adjuvanted QIV (aQIV)
Age 50–64QIV
Pregnant womenQIV (any trimester)
Chronic disease (heart, lung, kidney, liver, diabetes)QIV
ImmunosuppressedQIV (avoid LAIV)
Healthcare workersQIV
Children 2–10 yearsLAIV (nasal spray)
Carers and household contacts of immunocompromisedQIV

Influenza vs Common Cold

FeatureInfluenzaCommon Cold
OnsetSuddenGradual
FeverHigh (>38.5°C)Low-grade/absent
MyalgiaSevereMild
CoughDry, prominentMild
ProstrationMarkedRare
Duration5–7 days3–5 days